Cheap Flights from Manila Ninoy Aquino to Tokyo

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Compare Manila Ninoy Aquino to Tokyo flight deals

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Flight deals from Manila Ninoy Aquino to Tokyo

Looking for a cheap last-minute deal or the best return flight from Manila Ninoy Aquino to Tokyo? Find the lowest prices on one-way and return tickets right here.

Find the cheapest month to fly from Manila Ninoy Aquino to Tokyo

We’re always keeping an eye on fares, so you can find the best one in seconds. It looks like Manila Ninoy Aquino to Tokyo flights are currently cheapest in June.

Direct flights from Manila Ninoy Aquino to Tokyo

Alternative Manila Ninoy Aquino to Tokyo routes

Looking for the cheapest, fastest or easiest route from Manila Ninoy Aquino to Tokyo? You could fly into the following airports instead.

Manila to Tokyo: Flight information

The things to know before you go.
Cheapest flight foundر.ق.‏ 216
Cheapest month to flyJune
Average flight time4 hrs, 25 mins
Most popular airlinePhilippine Airlines
Average flights per week258

Finding cheap flights from Manila Ninoy Aquino to Tokyo: Frequently asked questions

There are 3 airports in Tokyo: Tokyo Haneda, Tokyo Narita and Omitama.
The best price we found for a return flight from Manila Ninoy Aquino to Tokyo is ر.ق.‏ 494. This is an estimate based on information collected from different airlines and travel providers over the last 4 days and is subject to change and availability.
4 hours and 25 minutes is the average flight time from Manila Ninoy Aquino to Tokyo.
Philippine Airlines, ANA (All Nippon Airways) and American Airlines fly direct from Manila Ninoy Aquino to Tokyo.
As of May 2025, there are 258 flights per week flying from Manila Ninoy Aquino to Tokyo.
The cheapest month to fly from Manila Ninoy Aquino to Tokyo is usually May 2025.
If you're flying from Manila Ninoy Aquino Airport, the cheapest airport near Tokyo is Tokyo Narita – which is 63.7 km away from the centre of Tokyo. We've found flights into this airport from ر.ق.‏ 494.
After crunching the numbers on our flight calendar, we found that it's currently cheapest to fly from Manila Ninoy Aquino Airport to Tokyo on Tuesday, 24 June 2025.
Yes – the average flight time is 4 hours and 25 minutes.
We show every price from over 1,200 airlines and travel agents, comparing them all so you don’t have to. If you know you want to fly to Tokyo but you’re not ready to book, set up a Price Alert. We’ll track prices for you, and let you know when they rise or fall.
We crunched all the numbers in our flight calendar and it looks like the cheapest time to book a flight to Tokyo is around 40 days in advance, so don’t leave your flight to the last minute.
In May, the average temperature is usually around 21°C. August is typically the warmest month in Tokyo, when it usually averages around 28°C. You can expect the least rain in February. The coldest month is February, with temperatures averaging 15°C. The rainiest month is May.
Currently, Cebu Pacific offers the cheapest flight tickets to Tokyo.

Travelling from Ninoy Aquino International Airport (MNL) to Tokyo: what you need to know

  • Expect to be in the air for 4 hours 50 minutes. That's the average duration of a direct flight from Ninoy Aquino International Airport to Tokyo.

  • Tokyo is one hour ahead of Manila, where Ninoy Aquino International Airport is located. Tokyo runs on the UTC+9 timezone.

  • Ninoy Aquino International Airport (MNL) to Narita International Airport (NRT) is the most popular route, with 67 weekly departures to pick from. If you have things to do before leaving, the last flight from MNL to NRT is with Philippine Airlines at 14:50. Opt for the first departure operated by Jetstar Japan at 00:40 if you want to fly out earlier.

  • For a relaxed start to your MNL to Tokyo flight, leave plenty of time to check in and find your gate. Arriving two hours before international departures and an hour before domestic flights is the general rule.

  • If you're flying during a bank holiday or another peak period, allow for even more time. A good general rule is two hours before domestic flights and up to four hours before international departures. Check-in and security lines will be longer.

  • Direct Ninoy Aquino International Airport to Tokyo tickets are available for booking. Haneda Airport (HND) is where you'll arrive.

  • A variety of airlines operate direct flights from Ninoy Aquino International Airport to Tokyo. They include:

  • Stopovers are the perfect opportunity to break up your journey and perhaps even tick off a new city. When searching for flight tickets from MNL to Tokyo, deselect the 'Direct flights only' box to see where you can stop along the way. Consider one of these popular options:

    • Taiwan Taoyuan International Airport (TPE)

    • Kansai International Airport (KIX)

    • Fukuoka Airport (FUK)

  • Located around 11 kilometres from central Manila, MNL can be reached in about 35 minutes by car, depending on traffic. Travelling on public transport will take roughly 1 hour 15 minutes.

  • Looking for a hotel near MNL? If you're catching an early flight from Ninoy Aquino International Airport to Tokyo, these stays set you up for a seamless send-off:

  • When it comes to Ninoy Aquino International Airport's on-time performance, 70.07% of flights meet their scheduled arrival time.

How to find the cheapest flights from Ninoy Aquino International Airport (MNL) to Tokyo

  • ر.ق.‏ 216 is the lowest price we've seen for a one-way Ninoy Aquino International Airport to Tokyo flight. A round-trip ticket right now is ر.ق.‏ 494. Depending on when you book and the availability, these fares may change.

  • To score cheap flights from MNL to Tokyo, reserve your trip three months before your departure date.

  • Schedule your trip for July. That's the best month for scoring an incredible deal on Ninoy Aquino International Airport to Tokyo tickets. If your travel dates are flexible, use the 'Whole month' tool to access the lowest price across each month.

  • Finding a cheap flight from MNL to Tokyo is a breeze with Price Alerts. All you need to do is create one of these automatic notifications and we'll notify you when a deal gets even better.

  • Tailor your trip with filters. Choose your preferred arrival and departure times, total journey duration and airlines. You can also sort the results by 'Cheapest,' 'Best' or 'Fastest' flights from Ninoy Aquino International Airport to Tokyo.

Airports in Tokyo

Haneda Airport (HND)

  • The distance from Haneda Airport (HND) to central Tokyo is roughly 16 kilometres. It takes about 15 minutes to get to the centre driving.

  • Consider staying in a hotel near HND if you're coming in on a late flight from Ninoy Aquino International Airport to Tokyo. Pick one of these options and avoid the hassle of a long transfer:

  • Grab a Haneda Airport rental car and explore Tokyo and beyond with your own wheels. Europcar, Nissan Rent a Car and Times are top providers to choose from here.

  • To get the best deal, reserve your vehicle from Haneda Airport about three weeks in advance of your flight from MNL to Tokyo.

  • The street address for HND is 3丁目 Hanedakuko, Ota.

Narita International Airport (NRT)

  • Narita International Airport (NRT) is about 64 kilometres from central Tokyo. After your flight from Ninoy Aquino International Airport to Tokyo, it'll take you around 1 hour to get to the heart of the city in a cab or ride-share.

  • There are some great places ready to welcome you near NRT. Unwind and get cosy after your MNL to Tokyo flight at any of these perfectly located options:

  • No need to worry about public transport schedules or cab lines. Grab a Narita International Airport rental car and blaze your own trail. Compare rates and availability from Airport Car Hire, JDM Rent a car and Miki Car Hire.

  • Lock in the best price by securing your ride from NRT four weeks ahead of time. You can also expect to have a greater selection of vehicles.

  • Narita International Airport can be found at 成田空港第2PTB(バス), Narita.

Best time to go to Tokyo

  • Plan your trip to Tokyo in peak season if you want a bustling atmosphere, but remember that prices are usually higher. Alternatively, book flights from Ninoy Aquino International Airport to Tokyo in the off-season when prices are cheaper and it's not as busy.

  • The warmest month in Tokyo is August, with temperatures ranging between 26ºC and 29ºC. Lock in your Ninoy Aquino International Airport to Tokyo flight ticket then if that's the weather you find most pleasant.

  • February has average temperatures of between 15ºC and 20ºC. Look for a cheap ticket from MNL to Tokyo around that time if you want to travel when it's cooler.

More about Tokyo

  • When it comes to looking for somewhere to lay your head, you'll find the top stays in Tokyo right here. Browse these options once you've booked your flight from Ninoy Aquino International Airport to Tokyo:

  • Every great journey has to include some sightseeing. Senso-ji Temple Yogodo, Tokyo Tower and Mag's Park Rooftop Shibuya Crossing are essential stops on your Tokyo itinerary.

Explore more of Japan

  • Tokyo has plenty to offer, but there are so many other parts of Japan you should also see. About 402 kilometres west of Tokyo, a trip to Osaka will fill your itinerary to the brim. Start with popular sights like Osaka Castle, Dotonbori and Universal Studios Japan.

  • If you want to check out another corner of Japan, consider Nagoya, about 257 kilometres west of Tokyo. Nagoya Castle, Atsuta Shrine and Osu Kannon Temple are the start of reasons to visit.

Prices shown on this page are estimated lowest prices only. Found in the last 45 days.